C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cytoplasmic FMR1 interacting protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000173497 Cyfip1-005 ENSMUSG00000030447 10090 + 7:55842250-55925786 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalOvaryENSMUST00000173497
Transcript ID Adrenal Ovary
ENSMUST00000173497 4.850±1.35 4.889±0.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006L9 CIL_0006L9_0002 CGP 7:55794148-55930700
CIL_0003A6 CIL_0003A6_0002 CGP 7:55841745-55962476

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000065127 cyfip1-001 protein_coding Danio_rerio 0 2122
ENSDART00000104233 cyfip1-201 protein_coding Danio_rerio 0 2078
ENSDART00000149396 cyfip2-001 protein_coding Danio_rerio 0 2037
ENSDART00000020014 cyfip2-201 protein_coding Danio_rerio 0 2028
ENSDART00000123607 cyfip2-202 protein_coding Danio_rerio 0 2028
ENSDART00000147898 cyfip1-003 processed_transcript Danio_rerio 0 279
ENST00000435847 CYFIP2-006 protein_coding Homo_sapiens 0 1465
ENST00000521420 CYFIP2-001 protein_coding Homo_sapiens 0 1882
ENST00000522463 CYFIP2-007 protein_coding Homo_sapiens 0 1465
ENST00000522892 CYFIP2-021 retained_intron Homo_sapiens 0 200
ENST00000541131 CYFIP2-201 protein_coding Homo_sapiens 0 2113
ENST00000557890 CYFIP1-014 retained_intron Homo_sapiens 0 224
ENST00000561263 CYFIP1-015 protein_coding Homo_sapiens 7.00649e-43 178
ENST00000610365 CYFIP1-003 protein_coding Homo_sapiens 0 4220
ENST00000611832 CYFIP1-017 protein_coding Homo_sapiens 0 616
ENST00000612288 CYFIP1-020 protein_coding Homo_sapiens 0 451
ENST00000613006 CYFIP1-016 protein_coding Homo_sapiens 0 641
ENST00000616178 CYFIP2-003 protein_coding Homo_sapiens 0 828
ENST00000617556 CYFIP1-004 protein_coding Homo_sapiens 0 2061
ENST00000617928 CYFIP1-001 protein_coding Homo_sapiens 0 4237
ENST00000618329 CYFIP2-002 protein_coding Homo_sapiens 0 2113
ENST00000619037 CYFIP1-018 nonsense_mediated_decay Homo_sapiens 9.80909e-45 183
ENST00000619290 CYFIP1-022 retained_intron Homo_sapiens 0 894
ENST00000619348 CYFIP1-005 retained_intron Homo_sapiens 0 1042
ENST00000620254 CYFIP2-008 protein_coding Homo_sapiens 0 2113
ENST00000620969 CYFIP2-202 protein_coding Homo_sapiens 0 446
ENST00000621036 CYFIP1-019 retained_intron Homo_sapiens 0 385
ENST00000621105 CYFIP1-023 retained_intron Homo_sapiens 0 494
ENST00000622576 CYFIP1-021 nonsense_mediated_decay Homo_sapiens 0 265

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