C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: glutamate receptor, ionotropic, AMPA1 (alpha 1)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000173531 Gria1-007 ENSMUSG00000020524 10090 + 11:57176518-57189793 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastOvaryTestisENSMUST00000173531
Transcript ID Adrenal Breast Ovary Testis
ENSMUST00000173531 0.212±0.09 1.100±0.27 2.794±0.00 0.468±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001UF CIL_0001UF_0002 CGP 11:56024987-57330244
CIL_0001UG CIL_0001UG_0002 CGP 11:57011387-57518617

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000285900 GRIA1-001 protein_coding Homo_sapiens 0 505
ENST00000340592 GRIA1-005 protein_coding Homo_sapiens 0 505
ENST00000448073 GRIA1-014 protein_coding Homo_sapiens 0 505
ENST00000481559 GRIA1-006 retained_intron Homo_sapiens 0 505
ENST00000518142 GRIA1-013 protein_coding Homo_sapiens 1.96182e-44 185
ENST00000518783 GRIA1-007 protein_coding Homo_sapiens 0 505
ENST00000518862 GRIA1-009 processed_transcript Homo_sapiens 0 505
ENST00000520966 GRIA1-011 processed_transcript Homo_sapiens 0 508
ENST00000521843 GRIA1-010 protein_coding Homo_sapiens 0 505

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