C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: jumonji domain containing 1C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000173689 Jmjd1c-001 ENSMUSG00000037876 10090 + 10:67185750-67256318 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000173689
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000173689 2.218±0.88 1.660±0.57 2.342±0.83 2.473±0.65 0.786±0.18 1.533±0.49 1.639±0.76 3.107±0.19 0.591±0.20 2.569±0.88 1.341±0.22

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0016568 IEA chromatin modification
GO:0046872 IEA metal ion binding
GO:0051213 IEA dioxygenase activity
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000327520 JMJD1C-002 protein_coding Homo_sapiens 0 1906
ENST00000399262 JMJD1C-001 protein_coding Homo_sapiens 0 7873
ENST00000402544 JMJD1C-010 processed_transcript Homo_sapiens 0 4724
ENST00000467356 JMJD1C-003 retained_intron Homo_sapiens 0 1083
ENST00000469152 JMJD1C-007 processed_transcript Homo_sapiens 0 976
ENST00000483298 JMJD1C-006 processed_transcript Homo_sapiens 0 267
ENST00000489372 JMJD1C-008 processed_transcript Homo_sapiens 0 830
ENST00000490669 JMJD1C-004 processed_transcript Homo_sapiens 0 335
ENST00000497922 JMJD1C-005 processed_transcript Homo_sapiens 0 547
ENST00000542921 JMJD1C-201 protein_coding Homo_sapiens 0 8359

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