C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: jumonji domain containing 1C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000402544 JMJD1C-010 ENSG00000171988 9606 - 10:63167348-63269187 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainMuscleENST00000402544
Transcript ID Brain Muscle
ENST00000402544 0.715±0.00 0.482±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007NX CIL_0007NX_0001 UCNEbase 10:63000173-63167486
CIL_0000H2 CIL_0000H2_0002 CGP 10:63133247-63465881

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000173689 Jmjd1c-001 protein_coding Mus_musculus 0 4724
ENSMUST00000174408 Jmjd1c-009 protein_coding Mus_musculus 0 4724
ENSMUST00000051446 Jmjd1c-201 protein_coding Mus_musculus 0 4723
ENSMUST00000174317 Jmjd1c-008 protein_coding Mus_musculus 0 2379
ENSMUST00000173762 Jmjd1c-003 protein_coding Mus_musculus 0 1648
ENSMUST00000173236 Jmjd1c-004 retained_intron Mus_musculus 0 857
ENSMUST00000173949 Jmjd1c-006 retained_intron Mus_musculus 0 669
ENSMUST00000173661 Jmjd1c-005 retained_intron Mus_musculus 0 669
ENSMUST00000173187 Jmjd1c-011 retained_intron Mus_musculus 0 348

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