C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | RNA binding motif protein 38 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000173720  |
Rbm38-008 |
ENSMUSG00000027510 |
10090 | + |
2:173022111-173033650  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008YW | CIL_0008YW_0002 | VISTA | 2:172561962-173164167 |
| CIL_0008TD | CIL_0008TD_0002 | VISTA | 2:172564603-173165839 |
| CIL_0008HJ | CIL_0008HJ_0002 | VISTA | 2:172734798-173336840 |
| CIL_0008BA | CIL_0008BA_0002 | VISTA | 2:172748983-173356071 |
| CIL_00030G | CIL_00030G_0002 | CGP | 2:173020498-173119525 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000342690
|
RBM38-005 | nonsense_mediated_decay | Homo_sapiens | 0 | 217 |
|
ENST00000344785
|
RBM38-003 | nonsense_mediated_decay | Homo_sapiens | 0 | 265 |
|
ENST00000356208
|
RBM38-001 | protein_coding | Homo_sapiens | 0 | 265 |
|
ENST00000440234
|
RBM38-004 | protein_coding | Homo_sapiens | 0 | 265 |
