| Transcript ID | Breast | Colon | Heart | Muscle |
|---|---|---|---|---|
| ENST00000342690 | 0.900±0.00 | 1.172±0.00 | 1.468±0.00 | 7.245±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | RNA binding motif protein 38 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000342690  |
RBM38-005 |
ENSG00000132819 |
9606 | + |
20:57391453-57407776  |
nonsense_mediated_decay |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008YW | CIL_0008YW_0001 | VISTA | 20:56856738-57458908 |
| CIL_0008TD | CIL_0008TD_0001 | VISTA | 20:56859467-57462541 |
| CIL_0008HJ | CIL_0008HJ_0001 | VISTA | 20:57109440-57710361 |
| CIL_0008BA | CIL_0008BA_0001 | VISTA | 20:57139654-57744237 |
| CIL_00030G | CIL_00030G_0001 | CGP | 20:57391407-57525652 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000166 | IEA | nucleotide binding |
| GO:0003676 | IEA | nucleic acid binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000029014
|
Rbm38-201 | protein_coding | Mus_musculus | 0 | 278 |
|
ENSMUST00000155512
|
Rbm38-002 | retained_intron | Mus_musculus | 0 | 278 |
|
ENSMUST00000173878
|
Rbm38-007 | nonsense_mediated_decay | Mus_musculus | 0 | 278 |
|
ENSMUST00000173393
|
Rbm38-001 | protein_coding | Mus_musculus | 0 | 278 |
|
ENSMUST00000173720
|
Rbm38-008 | nonsense_mediated_decay | Mus_musculus | 0 | 217 |
