C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitination factor E4B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000174343 Ube4b-011 ENSMUSG00000028960 10090 - 4:149329676-149425905 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainOvaryPlacentaTestisENSMUST00000174343
Transcript ID Adrenal Brain Ovary Placenta Testis
ENSMUST00000174343 4.164±0.65 13.576±0.00 8.477±2.90 17.246±4.79 1.539±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008IM CIL_0008IM_0002 VISTA 4:148744049-149345133
CIL_0006QX CIL_0006QX_0002 CGP 4:149176319-149426749

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000253251 UBE4B-002 protein_coding Homo_sapiens 0 2944
ENST00000343090 UBE4B-001 protein_coding Homo_sapiens 0 2944
ENST00000377153 UBE4B-005 protein_coding Homo_sapiens 0 315
ENST00000462658 UBE4B-008 retained_intron Homo_sapiens 0 315
ENST00000466379 UBE4B-003 retained_intron Homo_sapiens 0 710
ENST00000470736 UBE4B-011 protein_coding Homo_sapiens 0 821
ENST00000475795 UBE4B-007 processed_transcript Homo_sapiens 0 584
ENST00000487244 UBE4B-004 retained_intron Homo_sapiens 0 662
ENST00000488228 UBE4B-009 nonsense_mediated_decay Homo_sapiens 0 368

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