C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: jumonji domain containing 1C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000174408 Jmjd1c-009 ENSMUSG00000037876 10090 + 10:67127258-67256318 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000174408
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000174408 2.403±0.96 7.143±1.74 8.099±1.52 1.693±0.97 1.649±0.45 2.046±0.29 1.294±0.49 1.794±0.48 2.612±0.30 2.018±0.41 4.436±3.59 6.185±2.96 3.853±1.14

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0016568 IEA chromatin modification
GO:0046872 IEA metal ion binding
GO:0051213 IEA dioxygenase activity
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000327520 JMJD1C-002 protein_coding Homo_sapiens 0 1906
ENST00000399262 JMJD1C-001 protein_coding Homo_sapiens 0 8272
ENST00000402544 JMJD1C-010 processed_transcript Homo_sapiens 0 4724
ENST00000467356 JMJD1C-003 retained_intron Homo_sapiens 0 1083
ENST00000469152 JMJD1C-007 processed_transcript Homo_sapiens 0 758
ENST00000483298 JMJD1C-006 processed_transcript Homo_sapiens 0 267
ENST00000489372 JMJD1C-008 processed_transcript Homo_sapiens 0 222
ENST00000490669 JMJD1C-004 processed_transcript Homo_sapiens 0 335
ENST00000497922 JMJD1C-005 processed_transcript Homo_sapiens 0 547
ENST00000542921 JMJD1C-201 protein_coding Homo_sapiens 0 7871

Loading