C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: proteasome (prosome, macropain) activator subunit 1 (PA28 alpha)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000174419 Psme1-009 ENSMUSG00000022216 10090 + 14:55580748-55581529 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastOvaryPlacentaENSMUST00000174419
Transcript ID Brain Breast Ovary Placenta
ENSMUST00000174419 30.851±0.00 52.763±0.00 109.090±0.00 51.938±4.79

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00037E CIL_00037E_0002 CGP 14:55575617-55581529
CIL_00031C CIL_00031C_0002 CGP 14:55578123-55585302

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000206451 PSME1-001 protein_coding Homo_sapiens 0 429
ENST00000382708 PSME1-005 protein_coding Homo_sapiens 1.96182e-44 183
ENST00000558112 PSME1-012 nonsense_mediated_decay Homo_sapiens 0 449
ENST00000559123 PSME1-006 protein_coding Homo_sapiens 0 429
ENST00000559741 PSME1-011 retained_intron Homo_sapiens 0 449
ENST00000560420 PSME1-008 retained_intron Homo_sapiens 1.96182e-44 183
ENST00000561142 PSME1-010 retained_intron Homo_sapiens 0 335
ENST00000561435 PSME1-009 protein_coding Homo_sapiens 0 392

Loading