C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proteasome (prosome, macropain) activator subunit 1 (PA28 alpha)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000382708 PSME1-005 ENSG00000092010 9606 + 14:24136200-24138964 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00037E CIL_00037E_0001 CGP 14:24131275-24138967
CIL_00031C CIL_00031C_0001 CGP 14:24136158-24141588

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000082 TAS G1/S transition of mitotic cell cycle
GO:0000209 TAS protein polyubiquitination
GO:0000278 TAS mitotic cell cycle
GO:0000502 TAS proteasome complex
GO:0002474 TAS antigen processing and presentation of peptide antigen via MHC class I
GO:0002479 TAS antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent
GO:0005515 IEA protein binding
GO:0005654 TAS nucleoplasm
GO:0005737 TAS cytoplasm
GO:0005829 TAS cytosol
GO:0006521 TAS regulation of cellular amino acid metabolic process
GO:0006915 TAS apoptotic process
GO:0006977 TAS DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest
GO:0008537 IEA proteasome activator complex
GO:0010467 TAS gene expression
GO:0010950 IEA positive regulation of endopeptidase activity
GO:0016032 TAS viral process
GO:0016070 TAS RNA metabolic process
GO:0016071 TAS mRNA metabolic process
GO:0019884 IEA antigen processing and presentation of exogenous antigen
GO:0031145 TAS anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process
GO:0034641 TAS cellular nitrogen compound metabolic process
GO:0042590 TAS antigen processing and presentation of exogenous peptide antigen via MHC class I
GO:0042981 TAS regulation of apoptotic process
GO:0043066 TAS negative regulation of apoptotic process
GO:0044281 TAS small molecule metabolic process
GO:0051436 TAS negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle
GO:0051437 TAS positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle
GO:0051439 TAS regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle
GO:0061133 IEA endopeptidase activator activity
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000174259 Psme1-001 protein_coding Mus_musculus 0 869
ENSMUST00000174484 Psme1-006 protein_coding Mus_musculus 0 850
ENSMUST00000174791 Psme1-011 retained_intron Mus_musculus 0 608
ENSMUST00000191211 RP24-148E21.3-001 processed_pseudogene Mus_musculus 0 584
ENSMUST00000089619 Psme1-012 protein_coding Mus_musculus 0 582
ENSMUST00000174563 Psme1-010 protein_coding Mus_musculus 0 555
ENSMUST00000172738 Psme1-003 protein_coding Mus_musculus 0 490
ENSMUST00000173544 Psme1-002 retained_intron Mus_musculus 0 291
ENSMUST00000174419 Psme1-009 nonsense_mediated_decay Mus_musculus 1.96182e-44 183
ENSMUST00000174148 Psme1-007 retained_intron Mus_musculus 1.96182e-44 183
ENSMUST00000187022 RP23-109H7.1-001 processed_pseudogene Mus_musculus 4e-22 110

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