C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: MDS1 and EVI1 complex locus
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000174428 Mecom-011 ENSMUSG00000027684 10090 - 3:29983961-30013204 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverOvaryTestisENSMUST00000174428
Transcript ID Liver Ovary Testis
ENSMUST00000174428 0.044±0.00 0.947±0.00 0.056±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000711 CIL_000711_0002 CGP 3:29082023-30548008
CIL_0008SS CIL_0008SS_0002 VISTA 3:29679822-30280970
CIL_000921 CIL_000921_0002 VISTA 3:29804532-30409280
CIL_0007J8 CIL_0007J8_0002 UCNEbase 3:29834894-30452898
CIL_0001ZH CIL_0001ZH_0002 CGP 3:29951299-30599939

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264674 MECOM-201 protein_coding Homo_sapiens 0 983
ENST00000433243 MECOM-016 protein_coding Homo_sapiens 0 983
ENST00000460814 MECOM-017 protein_coding Homo_sapiens 0 750
ENST00000460890 MECOM-011 protein_coding Homo_sapiens 0 560
ENST00000461430 MECOM-014 retained_intron Homo_sapiens 0 422
ENST00000464456 MECOM-020 protein_coding Homo_sapiens 0 1382
ENST00000468789 MECOM-018 protein_coding Homo_sapiens 0 965
ENST00000472280 MECOM-019 protein_coding Homo_sapiens 0 981
ENST00000475754 MECOM-008 protein_coding Homo_sapiens 0 219
ENST00000481315 MECOM-007 protein_coding Homo_sapiens 0 355
ENST00000484519 MECOM-012 protein_coding Homo_sapiens 0 680
ENST00000487503 MECOM-010 protein_coding Homo_sapiens 0 560
ENST00000492586 MECOM-015 protein_coding Homo_sapiens 0 630
ENST00000494292 MECOM-004 protein_coding Homo_sapiens 0 966
ENST00000494597 MECOM-009 protein_coding Homo_sapiens 0 560

Loading