C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: proteasome (prosome, macropain) activator subunit 1 (PA28 alpha)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000174563 Psme1-010 ENSMUSG00000022216 10090 + 14:55578538-55580942 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastLiverOvaryTestisENSMUST00000174563
Transcript ID Breast Liver Ovary Testis
ENSMUST00000174563 46.122±0.00 29.062±0.00 111.363±7.44 1.923±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00037E CIL_00037E_0002 CGP 14:55575617-55581529
CIL_00031C CIL_00031C_0002 CGP 14:55578123-55585302

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0008537 IEA proteasome activator complex
GO:0010950 IPI positive regulation of endopeptidase activity
GO:0019884 IMP antigen processing and presentation of exogenous antigen
GO:0061133 IPI endopeptidase activator activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000206451 PSME1-001 protein_coding Homo_sapiens 0 555
ENST00000382708 PSME1-005 protein_coding Homo_sapiens 0 555
ENST00000470718 PSME1-004 processed_transcript Homo_sapiens 0 313
ENST00000559123 PSME1-006 protein_coding Homo_sapiens 0 555
ENST00000561142 PSME1-010 retained_intron Homo_sapiens 0 453
ENST00000561435 PSME1-009 protein_coding Homo_sapiens 0 555

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