C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proteasome (prosome, macropain) activator subunit 1 (PA28 alpha)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000470718 PSME1-004 ENSG00000092010 9606 + 14:24136228-24137761 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastHeartLiverOvaryENST00000470718
Transcript ID Bladder Breast Heart Liver Ovary
ENST00000470718 8.303±0.00 9.539±0.00 4.314±0.00 5.606±0.00 7.399±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00037E CIL_00037E_0001 CGP 14:24131275-24138967
CIL_00031C CIL_00031C_0001 CGP 14:24136158-24141588

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000172738 Psme1-003 protein_coding Mus_musculus 0 403
ENSMUST00000089619 Psme1-012 protein_coding Mus_musculus 0 403
ENSMUST00000174791 Psme1-011 retained_intron Mus_musculus 0 403
ENSMUST00000174259 Psme1-001 protein_coding Mus_musculus 0 403
ENSMUST00000174484 Psme1-006 protein_coding Mus_musculus 0 403
ENSMUST00000191211 RP24-148E21.3-001 processed_pseudogene Mus_musculus 0 329
ENSMUST00000174563 Psme1-010 protein_coding Mus_musculus 0 313

Loading