C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: polypyrimidine tract binding protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000174748 Ptbp3-007 ENSMUSG00000028382 10090 - 4:59481448-59549252 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungOvaryTestisENSMUST00000174748
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Ovary Testis
ENSMUST00000174748 9.194±1.36 15.125±3.92 15.994±3.15 20.616±6.02 2.390±0.00 7.981±2.13 5.652±0.59 12.091±2.01 20.063±4.58 3.358±0.26

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005X7 CIL_0005X7_0002 CGP 4:59314683-59549364
CIL_000228 CIL_000228_0003 CGP 4:59471868-59618689

Gene Ontology

GO IDEvidence TypeGO Description
GO:0048025 IMP negative regulation of mRNA splicing, via spliceosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000210227 PTBP3-001 protein_coding Homo_sapiens 0 309
ENST00000334318 PTBP3-201 protein_coding Homo_sapiens 0 1474
ENST00000343327 PTBP3-005 protein_coding Homo_sapiens 0 1511
ENST00000374255 PTBP3-006 protein_coding Homo_sapiens 0 1474
ENST00000374257 PTBP3-004 protein_coding Homo_sapiens 0 1474
ENST00000450374 PTBP3-003 protein_coding Homo_sapiens 0 219
ENST00000458258 PTBP3-202 protein_coding Homo_sapiens 0 1474
ENST00000487997 PTBP3-002 processed_transcript Homo_sapiens 0 401

Loading