C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SUMO/sentrin specific peptidase 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000175673 Senp6-003 ENSMUSG00000034252 10090 + 9:80066903-80094484 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonKidneyOvaryENSMUST00000175673
Transcript ID Adrenal Breast Colon Kidney Ovary
ENSMUST00000175673 6.230±1.94 5.300±1.91 3.674±1.95 3.100±0.00 8.381±3.97

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006PT CIL_0006PT_0002 CGP 9:79815051-80144953
CIL_0006PS CIL_0006PS_0002 CGP 9:80066903-80311729

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000327284 SENP6-010 protein_coding Homo_sapiens 0 673
ENST00000370010 SENP6-002 protein_coding Homo_sapiens 0 721
ENST00000447266 SENP6-004 protein_coding Homo_sapiens 0 619
ENST00000483859 SENP6-003 protein_coding Homo_sapiens 0 457
ENST00000487548 SENP6-005 retained_intron Homo_sapiens 4e-38 161
ENST00000493959 SENP6-001 nonsense_mediated_decay Homo_sapiens 0 316

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