C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006PS_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000112701-ENSG00000196586 CGP 9606 6:75601509-75919537
GeneTranscriptPositionBiotype
ENSG00000196586 (MYO6)
myosin VI 		ENST00000369975 (MYO6-003) 75817523-75916612 protein_coding
ENST00000369977 (MYO6-002) 75749332-75916612 protein_coding
ENST00000369981 (MYO6-201) 75749192-75919537 protein_coding
ENST00000369985 (MYO6-001) 75749209-75919536 protein_coding
ENST00000430435 (MYO6-005) 75890210-75908560 protein_coding
ENST00000462633 (MYO6-004) 75867060-75881818 processed_transcript
ENST00000615563 (MYO6-202) 75817516-75915217 protein_coding
ENSG00000200091 (RN7SKP163)
RNA, 7SK small nuclear pseudogene 163 		ENST00000363221 (RN7SKP163-201) 75654970-75655299 misc_RNA
ENSG00000217488 (RP11-474L11.5)
 ENST00000402263 (RP11-474L11.5-001) 75611190-75611945 transcribed_processed_pseudogene
ENST00000533798 (RP11-474L11.5-002) 75610958-75611788 processed_transcript
ENSG00000252156 (RNU6-155P)
RNA, U6 small nuclear 155, pseudogene 		ENST00000516347 (RNU6-155P-201) 75768059-75768158 snRNA
ENSG00000252498 (RNU6-1016P)
RNA, U6 small nuclear 1016, pseudogene 		ENST00000516689 (RNU6-1016P-201) 75644084-75644177 snRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0006PS_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000034252-ENSMUSG00000033577 CGP 10090 9:80066903-80311729
GeneTranscriptPositionBiotype
ENSMUSG00000033577 (Myo6)
myosin VI 		ENSMUST00000035889 (Myo6-001) 80165031-80311729 protein_coding
ENSMUST00000076140 (Myo6-003) 80217637-80311729 protein_coding
ENSMUST00000113266 (Myo6-004) 80217629-80311729 protein_coding
ENSMUST00000113268 (Myo6-002) 80165040-80311728 protein_coding
ENSMUST00000127779 (Myo6-014) 80217611-80308050 protein_coding
ENSMUST00000130496 (Myo6-005) 80262047-80266671 retained_intron
ENSMUST00000138650 (Myo6-009) 80306914-80308602 retained_intron
ENSMUST00000139981 (Myo6-007) 80286281-80292611 retained_intron
ENSMUST00000143804 (Myo6-008) 80305771-80307795 processed_transcript
ENSMUST00000156199 (Myo6-006) 80285414-80286508 retained_intron
ENSMUST00000183377 (Myo6-011) 80165038-80168028 retained_intron
ENSMUST00000184480 (Myo6-012) 80165227-80308097 protein_coding
ENSMUSG00000034252 (Senp6)
SUMO/sentrin specific peptidase 6 		ENSMUST00000037484 (Senp6-001) 80066903-80144953 protein_coding
ENSMUST00000164859 (Senp6-002) 80066973-80144168 protein_coding
ENSMUST00000165607 (Senp6-006) 80067493-80143906 protein_coding
ENSMUST00000175673 (Senp6-003) 80066903-80094484 retained_intron
ENSMUST00000175722 (Senp6-012) 80139025-80143709 retained_intron
ENSMUST00000175758 (Senp6-008) 80136373-80144171 retained_intron
ENSMUST00000175910 (Senp6-015) 80114039-80122051 processed_transcript
ENSMUST00000175999 (Senp6-007) 80067099-80144781 nonsense_mediated_decay
ENSMUST00000176360 (Senp6-005) 80092303-80121979 protein_coding
ENSMUST00000176527 (Senp6-014) 80123797-80136572 protein_coding
ENSMUST00000176563 (Senp6-013) 80142045-80144005 retained_intron
ENSMUST00000176607 (Senp6-004) 80103172-80143712 protein_coding
ENSMUST00000176640 (Senp6-009) 80066936-80113753 protein_coding
ENSMUST00000176648 (Senp6-011) 80114022-80118747 protein_coding
ENSMUST00000177544 (Senp6-010) 80067817-80087498 processed_transcript
ENSMUSG00000084917 (Gm17477)
predicted gene, 17477 		ENSMUST00000165458 (Gm17477-001) 80118895-80121937 lincRNA
ENSMUSG00000093779 (Gm20648)
predicted gene 20648 		ENSMUST00000175815 (Gm20648-001) 80073429-80073756 processed_pseudogene
ENSMUSG00000099016 (Gm27227)
predicted gene 27227 		ENSMUST00000183413 (Gm27227-001) 80263306-80265450 antisense

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006PS_0001ENSG00000196586ENST00000369975ENST00000369977ENST00000369981ENST00000369985ENST00000430435ENST00000462633ENST00000615563ENSG00000200091ENST00000363221ENSG00000217488ENST00000402263ENST00000533798ENSG00000252156ENST00000516347ENSG00000252498ENST00000516689CIL_0006PS_0002ENSMUSG00000033577ENSMUST00000035889ENSMUST00000076140ENSMUST00000113266ENSMUST00000113268ENSMUST00000127779ENSMUST00000130496ENSMUST00000138650ENSMUST00000139981ENSMUST00000143804ENSMUST00000156199ENSMUST00000183377ENSMUST00000184480ENSMUSG00000034252ENSMUST00000037484ENSMUST00000164859ENSMUST00000165607ENSMUST00000175673ENSMUST00000175722ENSMUST00000175758ENSMUST00000175910ENSMUST00000175999ENSMUST00000176360ENSMUST00000176527ENSMUST00000176563ENSMUST00000176607ENSMUST00000176640ENSMUST00000176648ENSMUST00000177544ENSMUSG00000084917ENSMUST00000165458ENSMUSG00000093779ENSMUST00000175815ENSMUSG00000099016ENSMUST00000183413
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006PS_0001ENSG00000196586ENST00000369975ENST00000369977ENST00000369981ENST00000369985ENST00000462633ENST00000615563ENSG00000200091ENST00000363221ENSG00000217488ENST00000402263ENST00000533798ENSG00000252156ENST00000516347ENSG00000252498ENST00000516689CIL_0006PS_0002ENSMUSG00000033577ENSMUST00000035889ENSMUST00000076140ENSMUST00000113266ENSMUST00000127779ENSMUST00000138650ENSMUST00000139981ENSMUST00000184480ENSMUSG00000034252ENSMUST00000037484ENSMUST00000164859ENSMUST00000165607ENSMUST00000175673ENSMUST00000175758ENSMUST00000175999ENSMUST00000176360ENSMUST00000176607ENSMUST00000176640ENSMUST00000176648ENSMUSG00000084917ENSMUST00000165458ENSMUSG00000093779ENSMUST00000175815ENSMUSG00000099016ENSMUST00000183413
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000196586 ENST00000369975 2.344±0.00 1.113±0.00 2.290±0.00 N/A 2.010±1.04 2.325±0.72 0.457±0.23 3.447±3.05 1.420±0.04 2.012±1.07 0.201±0.00 2.455±0.89 1.011±0.10 4.712±1.28
ENST00000369977 N/A N/A N/A 2.745±0.00 1.053±0.00 N/A N/A 3.390±2.63 N/A 1.064±0.19 0.092±0.00 0.609±0.00 0.712±0.25 1.304±0.01
ENST00000369981 N/A N/A N/A 5.181±0.00 N/A 0.569±0.00 N/A 1.744±0.00 0.967±0.00 1.130±0.00 N/A 2.389±1.55 N/A 0.823±0.00
ENST00000369985 N/A N/A N/A 0.536±0.00 N/A 0.819±0.00 0.443±0.22 N/A 1.497±0.00 1.705±0.00 N/A 0.810±0.49 N/A 2.030±0.00
ENST00000430435 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462633 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.114±0.00 N/A N/A N/A
ENST00000615563 3.327±0.00 0.992±0.00 1.792±0.00 2.253±1.05 1.931±0.00 N/A N/A 0.792±0.00 1.638±0.00 1.895±0.00 0.163±0.04 1.525±0.56 1.482±0.00 1.483±0.00
ENSG00000200091 ENST00000363221 0.463±0.00 0.697±0.00 0.203±0.00 0.482±0.00 0.052±0.00 N/A N/A N/A 0.516±0.00 N/A N/A 0.390±0.00 N/A 0.094±0.00
ENSG00000217488 ENST00000402263 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.054±0.00
ENST00000533798 N/A N/A N/A 0.045±0.00 N/A N/A N/A N/A 0.030±0.00 0.776±0.00 N/A 0.083±0.00 N/A N/A
ENSG00000252156 ENST00000516347 N/A 0.220±0.00 N/A 0.427±0.00 N/A N/A 0.390±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000252498 ENST00000516689 N/A N/A N/A N/A 1.739±0.00 N/A N/A N/A N/A N/A N/A N/A 1.204±0.00 3.428±2.83
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000033577 ENSMUST00000035889 N/A 2.902±0.00 N/A 5.761±0.00 N/A 5.547±0.68 N/A N/A N/A 4.829±2.10 0.592±0.18 5.530±2.49 0.841±0.00 0.903±0.12
ENSMUST00000076140 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.300±0.00 2.132±0.00 N/A
ENSMUST00000113266 N/A N/A N/A N/A N/A 7.385±0.00 0.549±0.00 N/A 1.124±0.00 N/A 0.450±0.04 12.954±3.04 3.099±2.10 0.889±0.52
ENSMUST00000113268 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127779 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.551±0.16 N/A N/A N/A
ENSMUST00000130496 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138650 4.712±1.54 8.698±0.47 3.762±0.00 N/A 3.771±0.45 20.109±4.25 N/A 23.958±2.45 3.202±1.80 9.534±0.34 1.829±0.12 14.018±1.41 14.172±8.67 N/A
ENSMUST00000139981 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 22.044±0.00
ENSMUST00000143804 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156199 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000183377 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000184480 N/A N/A N/A 8.641±0.00 N/A 8.520±0.00 N/A N/A N/A N/A N/A 10.577±0.00 2.151±0.01 0.622±0.00
ENSMUSG00000034252 ENSMUST00000037484 1.341±0.70 N/A 1.260±0.16 3.157±0.43 1.500±0.48 1.829±0.70 0.770±0.13 1.933±0.50 1.081±0.43 2.762±0.69 0.967±0.10 1.868±0.60 1.274±0.09 N/A
ENSMUST00000164859 0.926±0.20 N/A 2.761±0.47 3.341±0.33 0.445±0.00 N/A 0.863±0.21 1.517±0.44 1.695±0.84 N/A 2.139±0.64 2.252±0.00 4.358±1.69 3.942±0.79
ENSMUST00000165607 1.877±0.14 N/A 3.605±1.31 8.566±6.56 0.697±0.11 N/A 0.795±0.19 N/A 2.469±0.67 N/A 3.357±0.56 22.786±6.74 11.772±7.10 6.090±4.15
ENSMUST00000175673 N/A 6.230±1.94 N/A N/A 5.300±1.91 3.674±1.95 N/A 3.100±0.00 N/A N/A N/A 8.381±3.97 N/A N/A
ENSMUST00000175722 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000175758 1.942±0.22 N/A 5.150±0.04 4.295±0.00 2.635±1.25 N/A 3.090±0.34 4.695±1.28 2.911±1.13 5.605±0.00 4.256±0.84 21.070±6.82 8.607±5.16 N/A
ENSMUST00000175910 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000175999 N/A N/A N/A N/A N/A N/A N/A 0.872±0.00 N/A 1.405±0.00 1.561±0.00 N/A N/A N/A
ENSMUST00000176360 N/A N/A N/A N/A 3.978±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000176527 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000176563 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000176607 1.554±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.256±0.00 N/A N/A
ENSMUST00000176640 3.166±0.47 5.434±0.56 N/A N/A 4.137±0.92 4.102±1.49 3.213±0.00 3.797±0.87 0.841±0.15 5.435±1.18 N/A 4.226±1.37 N/A 10.532±2.74
ENSMUST00000176648 N/A N/A N/A N/A N/A N/A N/A 5.345±0.00 N/A N/A N/A N/A N/A N/A
ENSMUST00000177544 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000084917 ENSMUST00000165458 N/A N/A N/A N/A 0.755±0.04 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000093779 ENSMUST00000175815 0.267±0.04 0.562±0.06 N/A N/A N/A 0.508±0.00 0.199±0.00 0.257±0.00 0.467±0.23 1.307±0.00 N/A 1.253±0.21 0.598±0.00 N/A
ENSMUSG00000099016 ENSMUST00000183413 0.151±0.06 0.274±0.00 0.015±0.00 0.048±0.00 0.224±0.04 0.201±0.01 0.122±0.03 0.196±0.08 0.120±0.13 0.140±0.00 N/A 0.468±0.00 0.108±0.01 5.699±3.05

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