C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Ros1 proto-oncogene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000175892 Ros1-003 ENSMUSG00000019893 10090 - 10:52046016-52194956 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000175892
Transcript ID Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000175892 0.029±0.00 0.056±0.00 0.002±0.00 0.014±0.00 0.039±0.03 0.011±0.00 0.006±0.00 0.081±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005XO CIL_0005XO_0002 CGP 10:52022502-52195244

Gene Ontology

GO IDEvidence TypeGO Description
GO:0007283 IMP spermatogenesis
GO:0010629 IMP negative regulation of gene expression
GO:0010966 IMP regulation of phosphate transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000368507 ROS1-002 protein_coding Homo_sapiens 0 2658
ENST00000368508 ROS1-001 protein_coding Homo_sapiens 0 2656
ENST00000467125 GOPC-003 processed_transcript Homo_sapiens 0 263

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