| Transcript ID | Colon | Lung | Testis |
|---|---|---|---|
| ENSMUST00000175903 | 3.027±0.96 | 8.608±0.66 | 48.716±27.93 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | rho/rac guanine nucleotide exchange factor (GEF) 2 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000175903  |
Arhgef2-031 |
ENSMUSG00000028059 |
10090 | + |
3:88607791-88646929  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008P5 | CIL_0008P5_0002 | VISTA | 3:88218217-88823366 |
| CIL_000898 | CIL_000898_0002 | VISTA | 3:88224783-88827970 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000902 | IDA | cell morphogenesis |
| GO:0005089 | IDA | Rho guanyl-nucleotide exchange factor activity |
| GO:0005515 | IPI | protein binding |
| GO:0007015 | IPI | actin filament organization |
| GO:0008017 | IDA | microtubule binding |
| GO:0032321 | IDA:IEA | positive regulation of Rho GTPase activity |
| GO:0035023 | IDA | regulation of Rho protein signal transduction |
| GO:0035556 | IEA | intracellular signal transduction |
| GO:0043025 | IDA | neuronal cell body |
| GO:0043198 | IDA | dendritic shaft |
| GO:0046872 | IEA | metal ion binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000313667
|
ARHGEF2-002 | protein_coding | Homo_sapiens | 0 | 2928 |
|
ENST00000313695
|
ARHGEF2-003 | protein_coding | Homo_sapiens | 0 | 2966 |
|
ENST00000361247
|
ARHGEF2-001 | protein_coding | Homo_sapiens | 0 | 2964 |
|
ENST00000368315
|
ARHGEF2-201 | protein_coding | Homo_sapiens | 0 | 1020 |
|
ENST00000462460
|
ARHGEF2-004 | protein_coding | Homo_sapiens | 0 | 3094 |
|
ENST00000465079
|
ARHGEF2-011 | retained_intron | Homo_sapiens | 0 | 213 |
|
ENST00000470874
|
ARHGEF2-009 | nonsense_mediated_decay | Homo_sapiens | 0 | 420 |
|
ENST00000471589
|
ARHGEF2-010 | protein_coding | Homo_sapiens | 0 | 907 |
|
ENST00000476273
|
ARHGEF2-008 | processed_transcript | Homo_sapiens | 0 | 387 |
|
ENST00000487755
|
ARHGEF2-006 | retained_intron | Homo_sapiens | 0 | 217 |
|
ENST00000495070
|
ARHGEF2-005 | protein_coding | Homo_sapiens | 0 | 219 |
|
ENST00000497907
|
ARHGEF2-012 | protein_coding | Homo_sapiens | 0 | 854 |
|
ENST00000608543
|
ARHGEF2-013 | retained_intron | Homo_sapiens | 0 | 219 |
|
ENST00000609707
|
ARHGEF2-018 | protein_coding | Homo_sapiens | 0 | 656 |
