C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Rho/Rac guanine nucleotide exchange factor (GEF) 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000462460 ARHGEF2-004 ENSG00000116584 9606 - 1:155946855-155990073 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonHeartENST00000462460
Transcript ID Breast Colon Heart
ENST00000462460 1.231±0.00 1.316±0.00 0.787±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000898 CIL_000898_0001 VISTA 1:155789635-156392759
CIL_0008P5 CIL_0008P5_0001 VISTA 1:155795688-156399252

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005089 IEA Rho guanyl-nucleotide exchange factor activity
GO:0032321 IEA positive regulation of Rho GTPase activity
GO:0035023 IEA regulation of Rho protein signal transduction
GO:0035556 IEA intracellular signal transduction
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000175903 Arhgef2-031 protein_coding Mus_musculus 0 3094
ENSMUST00000176500 Arhgef2-003 protein_coding Mus_musculus 0 3040
ENSMUST00000177498 Arhgef2-002 protein_coding Mus_musculus 0 3007
ENSMUST00000175779 Arhgef2-004 protein_coding Mus_musculus 0 3005
ENSMUST00000029694 Arhgef2-001 protein_coding Mus_musculus 0 2961
ENSMUST00000177303 Arhgef2-030 protein_coding Mus_musculus 0 2959
ENSMUST00000107510 Arhgef2-005 protein_coding Mus_musculus 0 2953
ENSMUST00000170653 Arhgef2-006 protein_coding Mus_musculus 0 2920
ENSMUST00000176804 Arhgef2-008 protein_coding Mus_musculus 0 2920
ENSMUST00000175911 Arhgef2-009 protein_coding Mus_musculus 0 1892
ENSMUST00000177418 Arhgef2-007 retained_intron Mus_musculus 0 1845
ENSMUST00000176539 Arhgef2-013 protein_coding Mus_musculus 0 1044
ENSMUST00000177091 Arhgef2-010 retained_intron Mus_musculus 0 937
ENSMUST00000177023 Arhgef2-014 protein_coding Mus_musculus 0 830
ENSMUST00000176243 Arhgef2-017 protein_coding Mus_musculus 0 776
ENSMUST00000176528 Arhgef2-027 processed_transcript Mus_musculus 0 560
ENSMUST00000176401 Arhgef2-024 retained_intron Mus_musculus 0 516
ENSMUST00000176079 Arhgef2-023 retained_intron Mus_musculus 0 459
ENSMUST00000176123 Arhgef2-025 retained_intron Mus_musculus 0 455
ENSMUST00000176316 Arhgef2-019 protein_coding Mus_musculus 0 451
ENSMUST00000176879 Arhgef2-018 protein_coding Mus_musculus 0 425
ENSMUST00000176301 Arhgef2-026 retained_intron Mus_musculus 0 403
ENSMUST00000175745 Arhgef2-022 protein_coding Mus_musculus 0 374
ENSMUST00000176307 Arhgef2-016 protein_coding Mus_musculus 0 374
ENSMUST00000177099 Arhgef2-028 retained_intron Mus_musculus 0 324
ENSMUST00000177120 Arhgef2-021 retained_intron Mus_musculus 0 309
ENSMUST00000176400 Arhgef2-020 retained_intron Mus_musculus 0 307

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