C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: LIM homeobox transcription factor 1 beta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000176067 Lmx1b-003 ENSMUSG00000038765 10090 - 2:33564325-33640480 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainColonHeartLiverMusclePlacentaENSMUST00000176067
Transcript ID Adrenal Brain Colon Heart Liver Muscle Placenta
ENSMUST00000176067 0.020±0.00 0.155±0.00 0.075±0.02 0.086±0.00 0.014±0.01 0.053±0.00 0.203±0.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002XT CIL_0002XT_0002 CGP 2:33450287-33640511
CIL_0008M0 CIL_0008M0_0002 VISTA 2:33488143-34090459
CIL_0002XW CIL_0002XW_0002 CGP 2:33560965-33887946

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000355497 LMX1B-201 protein_coding Homo_sapiens 0 1155
ENST00000373474 LMX1B-002 protein_coding Homo_sapiens 0 1701
ENST00000526117 LMX1B-001 protein_coding Homo_sapiens 0 1502
ENST00000561065 LMX1B-003 protein_coding Homo_sapiens 0 1155

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