C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: syntaxin 5A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000176404 Stx5a-009 ENSMUSG00000010110 10090 + 19:8748533-8754984 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000176404
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000176404 22.294±0.00 59.014±0.00 39.417±9.76 18.365±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089X CIL_00089X_0002 VISTA 19:8644197-9245760

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000294179 STX5-001 protein_coding Homo_sapiens 0 457
ENST00000377897 STX5-002 protein_coding Homo_sapiens 0 346
ENST00000394690 STX5-005 protein_coding Homo_sapiens 0 457
ENST00000431400 STX5-007 protein_coding Homo_sapiens 0 348
ENST00000491231 STX5-004 nonsense_mediated_decay Homo_sapiens 0 411
ENST00000492066 STX5-003 nonsense_mediated_decay Homo_sapiens 0 457

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