| Transcript ID | Heart |
|---|---|
| ENST00000377897 | 0.250±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | syntaxin 5 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000377897  |
STX5-002 |
ENSG00000162236 |
9606 | - |
11:62806897-62832041  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00089X | CIL_00089X_0001 | VISTA | 11:62298635-62900076 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005484 | IDA | SNAP receptor activity |
| GO:0005515 | IPI:IEA | protein binding |
| GO:0005634 | IDA | nucleus |
| GO:0005794 | IDA | Golgi apparatus |
| GO:0006886 | IEA | intracellular protein transport |
| GO:0006903 | TAS | vesicle targeting |
| GO:0016020 | IEA | membrane |
| GO:0016021 | IEA | integral component of membrane |
| GO:0016192 | IEA | vesicle-mediated transport |
| GO:0031201 | TAS | SNARE complex |
| GO:0042147 | IDA | retrograde transport, endosome to Golgi |
| GO:0047485 | IPI | protein N-terminus binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000010254
|
Stx5a-004 | protein_coding | Mus_musculus | 0 | 1690 |
|
ENSMUST00000176381
|
Stx5a-001 | protein_coding | Mus_musculus | 0 | 1153 |
|
ENSMUST00000073430
|
Stx5a-002 | protein_coding | Mus_musculus | 0 | 1151 |
|
ENSMUST00000175872
|
Stx5a-006 | nonsense_mediated_decay | Mus_musculus | 0 | 1112 |
|
ENSMUST00000175901
|
Stx5a-013 | protein_coding | Mus_musculus | 0 | 961 |
|
ENSMUST00000177373
|
Stx5a-007 | protein_coding | Mus_musculus | 0 | 828 |
|
ENSMUST00000177322
|
Stx5a-005 | nonsense_mediated_decay | Mus_musculus | 0 | 771 |
|
ENSMUST00000176013
|
Stx5a-003 | nonsense_mediated_decay | Mus_musculus | 0 | 579 |
|
ENSMUST00000176009
|
Stx5a-015 | retained_intron | Mus_musculus | 0 | 472 |
|
ENSMUST00000176260
|
Stx5a-014 | retained_intron | Mus_musculus | 0 | 462 |
|
ENSMUST00000176182
|
Stx5a-016 | retained_intron | Mus_musculus | 0 | 418 |
|
ENSMUST00000176404
|
Stx5a-009 | retained_intron | Mus_musculus | 0 | 346 |
|
ENSMUST00000176314
|
Stx5a-012 | protein_coding | Mus_musculus | 0 | 344 |
|
ENSMUST00000175642
|
Stx5a-011 | retained_intron | Mus_musculus | 0 | 329 |
|
ENSMUST00000176093
|
Stx5a-010 | retained_intron | Mus_musculus | 0 | 327 |
|
ENSMUST00000176570
|
Stx5a-019 | protein_coding | Mus_musculus | 0 | 268 |
|
ENSMUST00000176968
|
Stx5a-018 | protein_coding | Mus_musculus | 0 | 268 |
