C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: Pbx/knotted 1 homeobox
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000176513 Pknox1-007 ENSMUSG00000006705 10090 + 17:31602738-31603584 retained_intron

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008QJ CIL_0008QJ_0002 VISTA 17:31053737-31653776
CIL_0000D3 CIL_0000D3_0002 CGP 17:31564749-31637199

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000291547 PKNOX1-001 protein_coding Homo_sapiens 0 311
ENST00000432907 PKNOX1-201 protein_coding Homo_sapiens 0 311
ENST00000474336 PKNOX1-003 retained_intron Homo_sapiens 0 207
ENST00000557820 PKNOX1-008 processed_transcript Homo_sapiens 0 311
ENST00000558955 PKNOX1-009 retained_intron Homo_sapiens 0 324
ENST00000560448 PKNOX1-005 nonsense_mediated_decay Homo_sapiens 0 311
ENST00000607150 PKNOX1-010 processed_transcript Homo_sapiens 0 309

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