C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: PBX/knotted 1 homeobox 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000432907 PKNOX1-201 ENSG00000160199 9606 + 21:42974510-43033931 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryENST00000432907
Transcript ID Ovary
ENST00000432907 0.698±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00013D CIL_00013D_0002 CGP 21:42879644-43033931
CIL_0000D3 CIL_0000D3_0001 CGP 21:42974510-43076943

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000176701 Pknox1-004 protein_coding Mus_musculus 0 1227
ENSMUST00000097352 Pknox1-001 protein_coding Mus_musculus 0 1227
ENSMUST00000175806 Pknox1-003 protein_coding Mus_musculus 0 1227
ENSMUST00000176895 Pknox1-002 retained_intron Mus_musculus 0 453
ENSMUST00000176513 Pknox1-007 retained_intron Mus_musculus 0 311
ENSDART00000053210 pknox1.1-001 protein_coding Danio_rerio 0.000000000000003 90
ENSDART00000125032 pknox1.2-001 protein_coding Danio_rerio 0.00000000000003 86
ENSMUST00000173269 Neu1-002 retained_intron Mus_musculus 0.00009 55

Loading