C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PBX/knotted 1 homeobox 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000557820 PKNOX1-008 ENSG00000160199 9606 + 21:43020451-43029949 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonLiverENST00000557820
Transcript ID Colon Liver
ENST00000557820 2.417±0.00 2.865±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00013D CIL_00013D_0002 CGP 21:42879644-43033931
CIL_0000D3 CIL_0000D3_0001 CGP 21:42974510-43076943

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000176701 Pknox1-004 protein_coding Mus_musculus 0 538
ENSMUST00000097352 Pknox1-001 protein_coding Mus_musculus 0 538
ENSMUST00000175806 Pknox1-003 protein_coding Mus_musculus 0 538
ENSMUST00000176513 Pknox1-007 retained_intron Mus_musculus 0 311

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