C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: golgi-specific brefeldin A-resistance factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000176992 Gbf1-002 ENSMUSG00000025224 10090 + 19:46246088-46286509 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000176992
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000176992 8.438±0.28 5.297±1.71 8.317±0.09 11.232±0.99 6.316±1.35 8.752±1.31 4.410±0.56 5.553±1.98 4.134±0.54 6.291±1.32 4.763±0.74 7.256±2.59 10.160±3.24 14.953±0.90

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005WI CIL_0005WI_0002 CGP 19:46135685-46286510
CIL_0005WJ CIL_0005WJ_0002 CGP 19:46152509-46312090

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005086 IBA ARF guanyl-nucleotide exchange factor activity
GO:0005802 IBA trans-Golgi network
GO:0016192 IBA vesicle-mediated transport
GO:0032012 IEA regulation of ARF protein signal transduction
GO:0043547 IEA positive regulation of GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000369983 GBF1-001 protein_coding Homo_sapiens 0 6981
ENST00000476019 GBF1-002 processed_transcript Homo_sapiens 0 241

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