C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | synaptogyrin 2 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000177241  |
Syngr2-004 |
ENSMUSG00000048277 |
10090 | + |
11:117809693-117813475  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007YS | CIL_0007YS_0002 | VISTA | 11:117565410-118167678 |
| CIL_0004UI | CIL_0004UI_0002 | CGP | 11:117797660-117814283 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0006605 | ISA | protein targeting |
| GO:0008021 | IDA | synaptic vesicle |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000225777
|
SYNGR2-001 | protein_coding | Homo_sapiens | 0 | 399 |
|
ENST00000569699
|
CTD-2022H16.3-001 | processed_pseudogene | Homo_sapiens | 0 | 394 |
|
ENST00000585591
|
SYNGR2-009 | protein_coding | Homo_sapiens | 0 | 399 |
|
ENST00000588282
|
SYNGR2-003 | protein_coding | Homo_sapiens | 0 | 235 |
|
ENST00000589168
|
SYNGR2-004 | protein_coding | Homo_sapiens | 0 | 235 |
|
ENST00000589183
|
SYNGR2-007 | nonsense_mediated_decay | Homo_sapiens | 0 | 235 |
|
ENST00000589711
|
SYNGR2-002 | protein_coding | Homo_sapiens | 0 | 536 |
|
ENST00000590201
|
SYNGR2-006 | protein_coding | Homo_sapiens | 0 | 399 |
|
ENST00000591770
|
SYNGR2-008 | retained_intron | Homo_sapiens | 4e-31 | 139 |
|
ENST00000592456
|
SYNGR2-005 | processed_transcript | Homo_sapiens | 0 | 235 |
