C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | syntaxin 5A | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000177373  |
Stx5a-007 |
ENSMUSG00000010110 |
10090 | + |
19:8741479-8755123  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00089X | CIL_00089X_0002 | VISTA | 19:8644197-9245760 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000139 | TAS | Golgi membrane |
| GO:0005484 | IEA | SNAP receptor activity |
| GO:0006886 | IEA | intracellular protein transport |
| GO:0016192 | TAS | vesicle-mediated transport |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000294179
|
STX5-001 | protein_coding | Homo_sapiens | 0 | 1101 |
|
ENST00000377897
|
STX5-002 | protein_coding | Homo_sapiens | 0 | 828 |
|
ENST00000394690
|
STX5-005 | protein_coding | Homo_sapiens | 0 | 1101 |
|
ENST00000431400
|
STX5-007 | protein_coding | Homo_sapiens | 0 | 558 |
|
ENST00000488303
|
STX5-008 | nonsense_mediated_decay | Homo_sapiens | 0 | 324 |
|
ENST00000491231
|
STX5-004 | nonsense_mediated_decay | Homo_sapiens | 0 | 1057 |
|
ENST00000492066
|
STX5-003 | nonsense_mediated_decay | Homo_sapiens | 0 | 1050 |
