C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Ros1 proto-oncogene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000177378 Ros1-004 ENSMUSG00000019893 10090 - 10:52045721-52194956 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeLiverMusclePlacentaTestisENSMUST00000177378
Transcript ID Adipose Liver Muscle Placenta Testis
ENSMUST00000177378 0.004±0.00 0.008±0.00 0.018±0.00 0.006±0.00 0.077±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005XO CIL_0005XO_0002 CGP 10:52022502-52195244

Gene Ontology

GO IDEvidence TypeGO Description
GO:0007283 IMP spermatogenesis
GO:0010629 IMP negative regulation of gene expression
GO:0010966 IMP regulation of phosphate transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000368507 ROS1-002 protein_coding Homo_sapiens 0 3964
ENST00000368508 ROS1-001 protein_coding Homo_sapiens 0 3530
ENST00000467125 GOPC-003 processed_transcript Homo_sapiens 0 263

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