C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: profilin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000177669 Pfn1-003 ENSMUSG00000018293 10090 - 11:70652612-70654608 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000177669
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000177669 12.805±0.00 19.181±0.00 6.929±0.00 3.105±2.79

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000C6 CIL_0000C6_0002 CGP 11:70647235-70654644
CIL_000060 CIL_000060_0002 CGP 11:70651850-70662513

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000225655 PFN1-001 protein_coding Homo_sapiens 0 322
ENST00000434838 NBPF3-003 nonsense_mediated_decay Homo_sapiens 0 226
ENST00000442087 PFN1P1-001 processed_pseudogene Homo_sapiens 0 267
ENST00000445829 PFN1P11-001 processed_pseudogene Homo_sapiens 1.4013e-45 185
ENST00000455938 PFN1P12-001 processed_pseudogene Homo_sapiens 0 211
ENST00000455962 PFN1P10-001 processed_pseudogene Homo_sapiens 0 226
ENST00000519266 ENO3-007 protein_coding Homo_sapiens 0 198
ENST00000520221 ENO3-019 protein_coding Homo_sapiens 6.02558e-44 182
ENST00000572383 PFN1-003 protein_coding Homo_sapiens 0 322
ENST00000574872 PFN1-002 protein_coding Homo_sapiens 0 289

Loading