C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: profilin 1 pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000442087 PFN1P1-001 ENSG00000233328 9606 - 1:171670517-171670939 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENST00000442087
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENST00000442087 0.103±0.00 0.332±0.00 0.125±0.00 0.059±0.00 0.106±0.00 0.058±0.00 0.051±0.00 0.113±0.00 0.371±0.26 0.455±0.26 0.268±0.11

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000018437 Pfn1-001 protein_coding Mus_musculus 0 603
ENSMUST00000108549 Pfn1-002 protein_coding Mus_musculus 0 436
ENSMUST00000178254 Pfn1-004 nonsense_mediated_decay Mus_musculus 0 398
ENSMUST00000177669 Pfn1-003 retained_intron Mus_musculus 0 267

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