C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transglutaminase 1, K polypeptide
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000178034 Tgm1-203 ENSMUSG00000022218 10090 - 14:55700009-55713492 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000178034
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000178034 0.504±0.28 0.182±0.00 0.341±0.05 0.232±0.13 3.506±0.81 0.254±0.13 0.097±0.04 10.709±1.67 7.147±3.86 5.948±4.72 0.099±0.13 0.582±0.27 56.949±20.70 0.069±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001SE CIL_0001SE_0002 CGP 14:55679083-55713492
CIL_0001SH CIL_0001SH_0002 CGP 14:55700009-55722257

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003810 IEA protein-glutamine gamma-glutamyltransferase activity
GO:0005913 IDA cell-cell adherens junction
GO:0009887 IMP organ morphogenesis
GO:0018149 IEA peptide cross-linking
GO:0019538 TAS protein metabolic process
GO:0031424 IEA keratinization
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000206765 TGM1-001 protein_coding Homo_sapiens 0 2676
ENST00000544573 TGM1-002 protein_coding Homo_sapiens 0 1424
ENST00000558074 TGM1-008 protein_coding Homo_sapiens 0 246
ENST00000559136 TGM1-009 protein_coding Homo_sapiens 0 1026

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