C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: adaptor-related protein complex 3, sigma 1 subunit, pseudogene 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000178107 Ap3s1-ps2-201 ENSMUSG00000094257 10090 + 8:94405211-94405792 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000178107
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000178107 0.427±0.16 0.804±0.50 0.125±0.00 0.078±0.03 1.183±0.00 0.330±0.01 0.076±0.00 0.136±0.05 0.124±0.05 0.148±0.00 0.069±0.01 0.670±0.42 0.036±0.03 0.537±0.55

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000316788 AP3S1-001 protein_coding Homo_sapiens 0 893
ENST00000395548 AP3S1-003 retained_intron Homo_sapiens 0 787
ENST00000407157 RP3-369A17.2-001 processed_pseudogene Homo_sapiens 0 418
ENST00000432577 RP11-365D23.4-001 processed_pseudogene Homo_sapiens 0 797
ENST00000505423 AP3S1-006 processed_transcript Homo_sapiens 0 237
ENST00000506430 AP3S1-008 nonsense_mediated_decay Homo_sapiens 0 660
ENST00000507436 AP3S1-007 retained_intron Homo_sapiens 0 398
ENST00000509055 AP3S1-005 retained_intron Homo_sapiens 0 294
ENST00000514118 AP3S1-004 processed_transcript Homo_sapiens 0 294
ENST00000515066 AP3S1-002 retained_intron Homo_sapiens 0 231
ENST00000605743 RP11-253I19.4-001 processed_pseudogene Homo_sapiens 0 405

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