C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: predicted gene 21992
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000178353 Gm21992-004 ENSMUSG00000096370 10090 - 19:4742913-4811612 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderMuscleENSMUST00000178353
Transcript ID Bladder Muscle
ENSMUST00000178353 4.064±0.00 0.697±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003YM CIL_0003YM_0006 CGP 19:4742913-4811612

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000310092 RBM4-001 protein_coding Homo_sapiens 1e-29 135
ENST00000310137 RBM14-001 protein_coding Homo_sapiens 0 599
ENST00000393979 RBM14-002 protein_coding Homo_sapiens 0 582
ENST00000396053 RBM4-008 protein_coding Homo_sapiens 2e-20 104
ENST00000408993 RBM4-002 protein_coding Homo_sapiens 1e-18 99
ENST00000409372 RBM14-003 protein_coding Homo_sapiens 0 577
ENST00000409738 RBM14-014 protein_coding Homo_sapiens 0 481
ENST00000412278 RBM14-RBM4-004 protein_coding Homo_sapiens 0 584
ENST00000421355 RBM14-RBM4-003 nonsense_mediated_decay Homo_sapiens 0 575
ENST00000443702 RBM14-004 protein_coding Homo_sapiens 0 555
ENST00000500635 RBM14-RBM4-002 protein_coding Homo_sapiens 0 521
ENST00000511114 RBM14-RBM4-005 processed_transcript Homo_sapiens 0 676
ENST00000512283 RBM14-013 processed_transcript Homo_sapiens 0 577

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