C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: amylase 2a3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000179314 Amy2a3-001 ENSMUSG00000093931 10090 - 3:113314455-113324052 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverENSMUST00000179314
Transcript ID Brain Liver
ENSMUST00000179314 0.028±0.00 0.077±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005I9 CIL_0005I9_0009 CGP 3:113281843-113324052
CIL_0005I9 CIL_0005I9_0007 CGP 3:113314455-113356658

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004556 IEA:ISS alpha-amylase activity
GO:0005509 ISS calcium ion binding
GO:0005615 ISS extracellular space
GO:0005975 IEA carbohydrate metabolic process
GO:0016052 ISS carbohydrate catabolic process
GO:0031404 ISS chloride ion binding
GO:0043169 IEA cation binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000330330 AMY1B-201 protein_coding Homo_sapiens 0 1515
ENST00000361355 AMY2B-001 protein_coding Homo_sapiens 0 1548
ENST00000370079 AMY1C-001 protein_coding Homo_sapiens 0 1519
ENST00000370080 AMY1B-001 protein_coding Homo_sapiens 0 1515
ENST00000370083 AMY1A-001 protein_coding Homo_sapiens 0 1515
ENST00000414303 AMY2A-001 protein_coding Homo_sapiens 0 1541
ENST00000422549 AMY1A-003 protein_coding Homo_sapiens 0 333
ENST00000423678 AMY2A-002 protein_coding Homo_sapiens 0 407
ENST00000425410 AMY1B-003 protein_coding Homo_sapiens 0 333
ENST00000430659 AMY1A-002 protein_coding Homo_sapiens 0 630
ENST00000435302 AMY2B-004 protein_coding Homo_sapiens 0 329
ENST00000438604 RP5-1108M17.5-001 unprocessed_pseudogene Homo_sapiens 7e-23 110
ENST00000440059 AMYP1-001 unprocessed_pseudogene Homo_sapiens 0 1064
ENST00000446703 AMY1B-002 protein_coding Homo_sapiens 0 630
ENST00000453959 AMY2B-005 protein_coding Homo_sapiens 0 292
ENST00000461518 AMY1A-004 retained_intron Homo_sapiens 0 702
ENST00000464691 AMY1B-004 processed_transcript Homo_sapiens 0 702
ENST00000477657 AMY2B-002 nonsense_mediated_decay Homo_sapiens 0 1138
ENST00000481821 AMY2B-007 processed_transcript Homo_sapiens 0 292
ENST00000491397 AMY2B-003 processed_transcript Homo_sapiens 0 1160
ENST00000494409 AMY1A-005 processed_transcript Homo_sapiens 3e-40 169
ENST00000497748 AMY2A-003 processed_transcript Homo_sapiens 0 512
ENST00000610592 AMY1A-201 protein_coding Homo_sapiens 0 708
ENST00000610648 AMY2B-201 protein_coding Homo_sapiens 0 1548
ENST00000622339 AMY2A-201 protein_coding Homo_sapiens 0 1537

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