C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 5445
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000180224 Gm5445-201 ENSMUSG00000094185 10090 + 13:12378158-12378640 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainHeartLiverMuscleOvaryPlacentaTestisENSMUST00000180224
Transcript ID Adipose Adrenal Bladder Brain Heart Liver Muscle Ovary Placenta Testis
ENSMUST00000180224 0.126±0.00 0.268±0.00 0.048±0.00 0.009±0.00 0.107±0.00 0.046±0.02 0.208±0.00 0.564±0.31 0.668±0.00 0.116±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008J8 CIL_0008J8_0002 VISTA 13:11813964-12415326
CIL_0008J9 CIL_0008J9_0002 VISTA 13:11824772-12428580
CIL_0008IY CIL_0008IY_0002 VISTA 13:11831518-12433920
CIL_00097Y CIL_00097Y_0002 VISTA 13:12065828-12670427

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000416622 RP11-329A14.2-001 processed_pseudogene Homo_sapiens 0 374
ENST00000441469 RP11-365O16.5-001 processed_pseudogene Homo_sapiens 0 248
ENST00000459863 RPL21P41-001 processed_pseudogene Homo_sapiens 0 289

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