C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000416622 RP11-329A14.2-001 ENSG00000232514 9606 - 1:48497263-48497736 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainENST00000416622
Transcript ID Brain
ENST00000416622 0.353±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000633 CIL_000633_0002 CGP 1:48295372-50023913
CIL_0008UZ CIL_0008UZ_0001 VISTA 1:48347085-48947691

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000121563 Gm15682-001 processed_pseudogene Mus_musculus 0 418
ENSMUST00000121545 Rpl21-ps15-001 processed_pseudogene Mus_musculus 0 412
ENSMUST00000155008 Gm10163-001 processed_pseudogene Mus_musculus 0 412
ENSMUST00000121309 Gm13370-001 processed_pseudogene Mus_musculus 0 412
ENSMUST00000089785 Gm10240-001 processed_pseudogene Mus_musculus 0 412
ENSMUST00000119542 Gm15921-001 processed_pseudogene Mus_musculus 0 412
ENSMUST00000099272 Rpl21-003 protein_coding Mus_musculus 0 412
ENSMUST00000075453 Rpl21-002 protein_coding Mus_musculus 0 412
ENSMUST00000035983 Rpl21-001 protein_coding Mus_musculus 0 412
ENSMUST00000119332 Gm13604-001 processed_pseudogene Mus_musculus 0 409
ENSMUST00000119140 Gm12411-001 processed_pseudogene Mus_musculus 0 407
ENSMUST00000119328 Gm14648-001 processed_pseudogene Mus_musculus 0 407
ENSMUST00000093411 Gm8054-201 processed_pseudogene Mus_musculus 0 407
ENSMUST00000084598 Gm10155-201 processed_pseudogene Mus_musculus 0 407
ENSMUST00000080223 Rpl21-ps3-201 processed_pseudogene Mus_musculus 0 401
ENSMUST00000071237 Rpl21-ps10-201 processed_pseudogene Mus_musculus 0 401
ENSMUST00000077278 Rpl21-ps11-201 processed_pseudogene Mus_musculus 0 401
ENSMUST00000130005 Rpl21-ps8-001 processed_pseudogene Mus_musculus 0 396
ENSMUST00000122260 Gm13653-001 processed_pseudogene Mus_musculus 0 396
ENSMUST00000178657 Gm10045-001 processed_pseudogene Mus_musculus 0 396
ENSMUST00000080330 Gm10916-201 processed_pseudogene Mus_musculus 0 396
ENSMUST00000095940 Rpl21-ps5-201 processed_pseudogene Mus_musculus 0 396
ENSMUST00000160079 Gm3355-001 processed_pseudogene Mus_musculus 0 394
ENSMUST00000095268 Gm9104-001 processed_pseudogene Mus_musculus 0 385
ENSMUST00000076314 Gm5528-001 processed_pseudogene Mus_musculus 0 385
ENSMUST00000117861 Gm12760-001 processed_pseudogene Mus_musculus 0 379
ENSMUST00000180049 Gm6919-001 processed_pseudogene Mus_musculus 0 379
ENSMUST00000179660 Gm16416-201 processed_pseudogene Mus_musculus 0 379
ENSMUST00000081668 Rpl21-ps12-201 processed_pseudogene Mus_musculus 0 379
ENSMUST00000077420 Rpl21-ps7-201 processed_pseudogene Mus_musculus 0 374
ENSMUST00000080279 Rpl21-ps14-201 processed_pseudogene Mus_musculus 0 374
ENSMUST00000180224 Gm5445-201 processed_pseudogene Mus_musculus 0 374
ENSMUST00000117491 Gm14336-001 processed_pseudogene Mus_musculus 0 372
ENSMUST00000120607 Gm13525-001 processed_pseudogene Mus_musculus 0 370
ENSMUST00000121800 Gm8880-001 processed_pseudogene Mus_musculus 0 363
ENSMUST00000119897 Rpl21-ps9-001 processed_pseudogene Mus_musculus 0 363
ENSMUST00000117993 Gm13641-001 processed_pseudogene Mus_musculus 0 361
ENSMUST00000121754 Gm12618-001 processed_pseudogene Mus_musculus 0 357
ENSMUST00000118772 Gm11975-001 processed_pseudogene Mus_musculus 0 355
ENSMUST00000080097 Gm16415-001 processed_pseudogene Mus_musculus 0 351
ENSMUST00000120348 Gm12123-001 processed_pseudogene Mus_musculus 0 344
ENSMUST00000079153 Gm8526-201 processed_pseudogene Mus_musculus 0 333
ENSMUST00000141391 Gm11281-001 processed_pseudogene Mus_musculus 0 331
ENSMUST00000118790 Gm11443-001 processed_pseudogene Mus_musculus 0 331
ENSMUST00000119242 Gm14115-001 processed_pseudogene Mus_musculus 0 329
ENSMUST00000074828 Rpl21-ps6-001 processed_pseudogene Mus_musculus 0 327
ENSMUST00000121662 Gm14053-001 processed_pseudogene Mus_musculus 0 324
ENSMUST00000080061 Gm8724-201 processed_pseudogene Mus_musculus 0 318
ENSMUST00000120315 Gm9378-001 processed_pseudogene Mus_musculus 0 289
ENSMUST00000122454 Gm8840-001 processed_pseudogene Mus_musculus 0 285
ENSMUST00000080237 Rpl21-ps4-201 protein_coding Mus_musculus 0 257
ENSMUST00000034094 Gins3-201 protein_coding Mus_musculus 0 196
ENSMUST00000185232 RP23-478I8.1-001 processed_pseudogene Mus_musculus 9.80909e-45 183
ENSMUST00000120018 Gm13518-001 processed_pseudogene Mus_musculus 1e-38 163
ENSMUST00000170118 Gm17113-001 processed_pseudogene Mus_musculus 2e-26 122

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