C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | retinitis pigmentosa GTPase regulator interacting protein 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000180646  |
Rpgrip1-002 |
ENSMUSG00000057132 |
10090 | + |
14:52110903-52160446  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00027O | CIL_00027O_0002 | CGP | 14:52073380-52163546 |
| CIL_00027P | CIL_00027P_0002 | CGP | 14:52110704-52197239 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005515 | IPI | protein binding |
| GO:0005929 | IDA | cilium |
| GO:0005930 | IDA | axoneme |
| GO:0007601 | IMP | visual perception |
| GO:0031513 | IDA | nonmotile primary cilium |
| GO:0042462 | IMP | eye photoreceptor cell development |
| GO:0060041 | IMP | retina development in camera-type eye |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000382933
|
RPGRIP1-002 | protein_coding | Homo_sapiens | 0 | 625 |
|
ENST00000400017
|
RPGRIP1-001 | protein_coding | Homo_sapiens | 0 | 625 |
|
ENST00000553927
|
RPGRIP1-005 | retained_intron | Homo_sapiens | 0 | 625 |
|
ENST00000555322
|
RPGRIP1-004 | nonsense_mediated_decay | Homo_sapiens | 0 | 625 |
|
ENST00000555489
|
RPGRIP1-003 | nonsense_mediated_decay | Homo_sapiens | 0 | 625 |
|
ENST00000555587
|
RPGRIP1-009 | protein_coding | Homo_sapiens | 0 | 625 |
|
ENST00000556336
|
RPGRIP1-010 | protein_coding | Homo_sapiens | 0 | 625 |
|
ENST00000557771
|
RPGRIP1-011 | protein_coding | Homo_sapiens | 0 | 625 |
