C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 8649
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000181799 Gm8649-001 ENSMUSG00000097669 10090 - 6:6329762-6329994 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartTestisENSMUST00000181799
Transcript ID Heart Testis
ENSMUST00000181799 0.747±0.02 0.629±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007W8 CIL_0007W8_0002 VISTA 6:5861772-6464755
CIL_00097Z CIL_00097Z_0002 VISTA 6:6016533-6617120
CIL_00078J CIL_00078J_0002 CGP 6:6041218-6578658
CIL_000980 CIL_000980_0002 VISTA 6:6063941-6664446
CIL_000981 CIL_000981_0002 VISTA 6:6158809-6759381

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000447672 RP11-28P17.3-001 processed_pseudogene Homo_sapiens 1e-39 167
ENST00000498403 RP11-1070A24.1-001 processed_pseudogene Homo_sapiens 0 204
ENST00000515536 RP11-166J22.1-001 processed_pseudogene Homo_sapiens 6e-37 158
ENST00000568867 RP11-883G10.1-001 unprocessed_pseudogene Homo_sapiens 2e-36 156

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