C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000498403 RP11-1070A24.1-001 ENSG00000244159 9606 - 8:53887008-53887244 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainPlacentaTestisENST00000498403
Transcript ID Adipose Brain Placenta Testis
ENST00000498403 0.203±0.00 0.429±0.00 0.130±0.00 0.126±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008TN CIL_0008TN_0001 VISTA 8:53576629-54178623

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000117559 Gm13215-001 processed_pseudogene Mus_musculus 0 263
ENSMUST00000119780 Gm8430-001 processed_pseudogene Mus_musculus 0 252
ENSMUST00000102844 Rps27a-004 protein_coding Mus_musculus 0 252
ENSMUST00000102845 Rps27a-003 protein_coding Mus_musculus 0 252
ENSMUST00000147782 Rps27a-002 processed_transcript Mus_musculus 0 252
ENSMUST00000078766 Rps27a-ps2-001 processed_pseudogene Mus_musculus 0 241
ENSMUST00000120373 Gm13532-001 processed_pseudogene Mus_musculus 0 224
ENSMUST00000185489 RP23-125B4.3-001 processed_pseudogene Mus_musculus 0 222
ENSMUST00000191424 RP24-388H6.1-001 processed_pseudogene Mus_musculus 0 219
ENSMUST00000150739 Rps27a-005 processed_transcript Mus_musculus 0 219
ENSMUST00000119963 Gm13815-001 processed_pseudogene Mus_musculus 0 217
ENSMUST00000181799 Gm8649-001 processed_pseudogene Mus_musculus 0 204

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