C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Rho guanine nucleotide exchange factor (GEF) 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000182190 Arhgef5-005 ENSMUSG00000033542 10090 + 6:43279457-43289316 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainLiverMuscleOvaryPlacentaTestisENSMUST00000182190
Transcript ID Adipose Bladder Brain Liver Muscle Ovary Placenta Testis
ENSMUST00000182190 1.805±0.84 6.459±0.63 0.331±0.00 0.996±0.57 0.330±0.02 4.853±0.00 5.241±0.00 0.240±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00074V CIL_00074V_0002 CGP 6:43235578-43289320
CIL_00074U CIL_00074U_0002 CGP 6:43265582-43309554

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000056217 ARHGEF5-001 protein_coding Homo_sapiens 0 1131
ENST00000471847 ARHGEF5-005 protein_coding Homo_sapiens 0 1131
ENST00000474817 ARHGEF5-002 protein_coding Homo_sapiens 0 942
ENST00000483587 ARHGEF34P-001 unprocessed_pseudogene Homo_sapiens 0 1127

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