C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glyceraldehyde-3-phosphate dehydrogenase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000182277 Gapdh-010 ENSMUSG00000057666 10090 - 6:125163288-125165603 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016620 IEA oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 206
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 206
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 3.9937e-43 180
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 206
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 206
ENST00000419696 GAPDHP64-001 processed_pseudogene Homo_sapiens 1e-32 145
ENST00000422905 GAPDHP67-001 processed_pseudogene Homo_sapiens 2e-24 117
ENST00000423136 GAPDHP55-001 processed_pseudogene Homo_sapiens 1e-30 137
ENST00000424043 GAPDHP46-001 processed_pseudogene Homo_sapiens 3e-28 130
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 195
ENST00000425504 GAPDHP69-001 processed_pseudogene Homo_sapiens 2e-29 134
ENST00000426454 GAPDHP51-001 processed_pseudogene Homo_sapiens 6e-35 152
ENST00000444823 GAPDHP23-001 processed_pseudogene Homo_sapiens 2e-20 104
ENST00000447427 GAPDHP27-001 processed_pseudogene Homo_sapiens 5e-31 139
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 206
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 206
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 206
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 2.99878e-43 180
ENST00000503632 GAPDHP38-001 processed_pseudogene Homo_sapiens 4e-32 143
ENST00000507324 GAPDHP61-001 processed_pseudogene Homo_sapiens 2e-39 167
ENST00000509325 GAPDHP31-001 processed_pseudogene Homo_sapiens 1e-22 111
ENST00000512278 GAPDHP76-001 unprocessed_pseudogene Homo_sapiens 8e-24 115
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 1e-27 128
ENST00000513846 GAPDHP60-001 processed_pseudogene Homo_sapiens 6e-35 152
ENST00000515313 GAPDHP62-001 processed_pseudogene Homo_sapiens 2e-29 134

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