C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 5597
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000182353 Gm5597-001 ENSMUSG00000098009 10090 - 7:76244746-76245938 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastLiverOvaryTestisENSMUST00000182353
Transcript ID Bladder Brain Breast Liver Ovary Testis
ENSMUST00000182353 0.014±0.00 0.660±0.00 0.052±0.00 0.092±0.16 0.193±0.12 0.061±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006RF CIL_0006RF_0002 CGP 7:75848338-76766608

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000266775 TDG-003 protein_coding Homo_sapiens 0 1013
ENST00000392872 TDG-001 protein_coding Homo_sapiens 0 1013
ENST00000537100 TDG-008 protein_coding Homo_sapiens 0 577
ENST00000540956 TDG-006 nonsense_mediated_decay Homo_sapiens 0 484
ENST00000542926 TDG-009 retained_intron Homo_sapiens 0 460
ENST00000543961 TDGP1-001 processed_pseudogene Homo_sapiens 0 941
ENST00000544861 TDG-004 protein_coding Homo_sapiens 0 1005

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