C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: thymine-DNA glycosylase pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000543961 TDGP1-001 ENSG00000255725 9606 + 12:25803298-25804526 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyENST00000543961
Transcript ID Kidney
ENST00000543961 0.010±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000121229 Gm9855-001 processed_pseudogene Mus_musculus 0 968
ENSMUST00000151390 Tdg-002 protein_coding Mus_musculus 0 968
ENSMUST00000092266 Tdg-001 protein_coding Mus_musculus 0 968
ENSMUST00000051363 Gm5806-201 processed_pseudogene Mus_musculus 0 961
ENSMUST00000182353 Gm5597-001 processed_pseudogene Mus_musculus 0 941
ENSMUST00000177353 Tdg-011 protein_coding Mus_musculus 0 544
ENSMUST00000176326 Tdg-009 protein_coding Mus_musculus 0 540
ENSMUST00000176195 Tdg-010 nonsense_mediated_decay Mus_musculus 0 472
ENSMUST00000125970 Tdg-007 retained_intron Mus_musculus 0 412
ENSMUST00000135652 Tdg-006 retained_intron Mus_musculus 0 287
ENSMUST00000142658 Tdg-008 retained_intron Mus_musculus 0 285

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