C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 7456
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000182862 Gm7456-001 ENSMUSG00000098099 10090 + 12:49140256-49141266 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastHeartKidneyLiverTestisENSMUST00000182862
Transcript ID Breast Heart Kidney Liver Testis
ENSMUST00000182862 0.037±0.00 0.028±0.00 0.030±0.00 0.039±0.00 0.032±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00095I CIL_00095I_0002 VISTA 12:49074505-49676068

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000058384 gapdhs-001 protein_coding Danio_rerio 0 246
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 941
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 697
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 920
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 941
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 941
ENST00000398586 GAPDHP15-001 processed_pseudogene Homo_sapiens 0 368
ENST00000403053 RP1-182O16.2-001 processed_pseudogene Homo_sapiens 0 189
ENST00000423411 GAPDHP73-001 processed_pseudogene Homo_sapiens 0 636
ENST00000426454 GAPDHP51-001 processed_pseudogene Homo_sapiens 0 538
ENST00000450301 GAPDHP21-001 processed_pseudogene Homo_sapiens 0 549
ENST00000450472 GAPDHP14-001 processed_pseudogene Homo_sapiens 0 279
ENST00000452570 GAPDHP1-001 processed_pseudogene Homo_sapiens 0 856
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 248
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 697
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 697
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 708
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 721
ENST00000613707 RP11-343D24.1-001 processed_pseudogene Homo_sapiens 0 394
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 822

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