C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000403053 RP1-182O16.2-001 ENSG00000216360 9606 - 6:5817421-5818366 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000403053
Transcript ID Adipose Adrenal Brain Breast Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000403053 0.016±0.00 0.084±0.00 0.018±0.00 0.069±0.00 0.044±0.00 0.067±0.00 0.143±0.00 0.014±0.00 0.092±0.03 0.040±0.00 0.081±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00005H CIL_00005H_0001 CGP 6:5261044-6007605

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000182273 Gm26931-001 processed_pseudogene Mus_musculus 0 219
ENSMUST00000181982 Gm5342-001 processed_pseudogene Mus_musculus 0 207
ENSMUST00000182862 Gm7456-001 processed_pseudogene Mus_musculus 0 189
ENSMUST00000182201 Gm5300-001 processed_pseudogene Mus_musculus 3.00018e-42 176
ENSMUST00000117317 Gm5187-001 processed_pseudogene Mus_musculus 1e-36 158
ENSMUST00000182628 Gm26937-001 processed_pseudogene Mus_musculus 3e-32 143
ENSMUST00000182962 Gm8824-001 processed_pseudogene Mus_musculus 0.00006 53

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