C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glyceraldehyde 3 phosphate dehydrogenase pseudogene 21
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000450301 GAPDHP21-001 ENSG00000236993 9606 - 10:55667341-55668350 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLungMuscleOvaryTestisENST00000450301
Transcript ID Adipose Adrenal Brain Breast Colon Heart Lung Muscle Ovary Testis
ENST00000450301 0.031±0.00 0.032±0.00 0.088±0.00 0.067±0.00 0.047±0.00 0.072±0.00 0.030±0.00 0.082±0.00 0.039±0.00 0.067±0.02

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000180167 Gm10359-001 processed_pseudogene Mus_musculus 0 874
ENSMUST00000119978 Gm12671-001 processed_pseudogene Mus_musculus 0 874
ENSMUST00000107041 Gm7336-201 processed_pseudogene Mus_musculus 0 874
ENSMUST00000073605 Gapdh-201 protein_coding Mus_musculus 0 874
ENSMUST00000118875 Gapdh-001 protein_coding Mus_musculus 0 874
ENSMUST00000117757 Gapdh-003 protein_coding Mus_musculus 0 874
ENSMUST00000100754 Gm2606-001 processed_pseudogene Mus_musculus 0 869
ENSMUST00000119246 Gm12286-001 processed_pseudogene Mus_musculus 0 869
ENSMUST00000180654 Gm12033-001 processed_pseudogene Mus_musculus 0 869
ENSMUST00000113842 Gm5138-001 processed_pseudogene Mus_musculus 0 869
ENSMUST00000119551 Gm12070-001 processed_pseudogene Mus_musculus 0 869
ENSMUST00000180755 Gm5559-001 processed_pseudogene Mus_musculus 0 869
ENSMUST00000181051 Gm2574-001 processed_pseudogene Mus_musculus 0 869
ENSMUST00000166539 Gm2308-001 processed_pseudogene Mus_musculus 0 865
ENSMUST00000121658 Gm13394-001 processed_pseudogene Mus_musculus 0 865
ENSMUST00000121831 Gm14760-001 processed_pseudogene Mus_musculus 0 863
ENSMUST00000181181 Gm3272-001 processed_pseudogene Mus_musculus 0 863
ENSMUST00000106443 Gm4609-001 processed_pseudogene Mus_musculus 0 857
ENSMUST00000180966 Gm20899-001 processed_pseudogene Mus_musculus 0 857
ENSMUST00000108740 Gm10358-201 processed_pseudogene Mus_musculus 0 857
ENSMUST00000179228 Gm10481-001 processed_pseudogene Mus_musculus 0 857
ENSMUST00000120014 Gm13292-001 processed_pseudogene Mus_musculus 0 856
ENSMUST00000182989 Gm4691-002 processed_transcript Mus_musculus 0 852
ENSMUST00000182339 Gm4691-001 transcribed_processed_pseudogene Mus_musculus 0 846
ENSMUST00000181493 Gm3200-001 processed_pseudogene Mus_musculus 0 846
ENSMUST00000145057 Gm10284-001 processed_pseudogene Mus_musculus 0 846
ENSMUST00000077127 Gm3839-201 processed_pseudogene Mus_musculus 0 846
ENSMUST00000181173 Gm3839-001 protein_coding Mus_musculus 0 846
ENSMUST00000182991 Gm4575-001 processed_pseudogene Mus_musculus 0 841
ENSMUST00000121760 Gm5863-001 processed_pseudogene Mus_musculus 0 841
ENSMUST00000099956 Gm8055-001 processed_pseudogene Mus_musculus 0 835
ENSMUST00000094175 Gm10291-201 processed_pseudogene Mus_musculus 0 830
ENSMUST00000071282 Gm3222-201 processed_pseudogene Mus_musculus 0 830
ENSMUST00000122433 Gm14148-001 processed_pseudogene Mus_musculus 0 824
ENSMUST00000182336 Gm5652-001 processed_pseudogene Mus_musculus 0 824
ENSMUST00000086739 Gm10566-001 processed_pseudogene Mus_musculus 0 821
ENSMUST00000120911 Gm12416-001 processed_pseudogene Mus_musculus 0 819
ENSMUST00000105222 Gm10327-001 processed_pseudogene Mus_musculus 0 819
ENSMUST00000118655 Gm12182-001 processed_pseudogene Mus_musculus 0 808
ENSMUST00000087222 Gm3695-001 processed_pseudogene Mus_musculus 0 808
ENSMUST00000182798 Gm2445-001 processed_pseudogene Mus_musculus 0 806
ENSMUST00000117732 Gm11185-001 processed_pseudogene Mus_musculus 0 806
ENSMUST00000182522 Gm3534-001 processed_pseudogene Mus_musculus 0 802
ENSMUST00000182720 Gm8349-001 processed_pseudogene Mus_musculus 0 797
ENSMUST00000095320 Gm10313-001 processed_pseudogene Mus_musculus 0 791
ENSMUST00000089534 Gm7293-201 protein_coding Mus_musculus 0 787
ENSMUST00000119851 Gm14111-001 processed_pseudogene Mus_musculus 0 785
ENSMUST00000050581 Gm5069-002 protein_coding Mus_musculus 0 780
ENSMUST00000182266 Gm2467-001 processed_pseudogene Mus_musculus 0 780
ENSMUST00000182243 Gm4217-001 processed_pseudogene Mus_musculus 0 776
ENSMUST00000182456 Gm16470-001 processed_pseudogene Mus_musculus 0 774
ENSMUST00000117933 Gm15191-001 processed_pseudogene Mus_musculus 0 773
ENSMUST00000119418 Gm13464-001 processed_pseudogene Mus_musculus 0 773
ENSMUST00000182661 Gm7251-001 processed_pseudogene Mus_musculus 0 773
ENSMUST00000182467 Gm6981-001 processed_pseudogene Mus_musculus 0 769
ENSMUST00000182630 Gm2546-001 processed_pseudogene Mus_musculus 0 763
ENSMUST00000120200 Gm11557-001 processed_pseudogene Mus_musculus 0 758
ENSMUST00000133495 3000002C10Rik-001 transcribed_processed_pseudogene Mus_musculus 0 756
ENSMUST00000125451 3000002C10Rik-003 processed_transcript Mus_musculus 0 756
ENSMUST00000144161 3000002C10Rik-002 processed_transcript Mus_musculus 0 756
ENSMUST00000183246 Gm2193-001 processed_pseudogene Mus_musculus 0 756
ENSMUST00000118182 Gm5944-001 processed_pseudogene Mus_musculus 0 756
ENSMUST00000180973 Gm3809-001 processed_pseudogene Mus_musculus 0 756
ENSMUST00000118653 Gm8864-001 processed_pseudogene Mus_musculus 0 756
ENSMUST00000183305 Gm4654-001 processed_pseudogene Mus_musculus 0 756
ENSMUST00000183272 Gapdh-017 protein_coding Mus_musculus 0 754
ENSMUST00000182449 Gm6944-001 processed_pseudogene Mus_musculus 0 739
ENSMUST00000183250 Gm8756-001 processed_pseudogene Mus_musculus 0 730
ENSMUST00000182754 Gm8330-001 processed_pseudogene Mus_musculus 0 728
ENSMUST00000095717 Gm4795-001 processed_pseudogene Mus_musculus 0 721
ENSMUST00000122352 Gm11953-001 processed_pseudogene Mus_musculus 0 719
ENSMUST00000182150 Gm5210-001 processed_pseudogene Mus_musculus 0 715
ENSMUST00000182599 Gm6967-001 processed_pseudogene Mus_musculus 0 704
ENSMUST00000182071 Gm9034-001 processed_pseudogene Mus_musculus 0 702
ENSMUST00000182525 Gm5430-001 processed_pseudogene Mus_musculus 0 701
ENSMUST00000117318 Gm11453-001 processed_pseudogene Mus_musculus 0 695
ENSMUST00000182596 Gm5732-001 processed_pseudogene Mus_musculus 0 684
ENSMUST00000181413 Gm6498-002 transcribed_processed_pseudogene Mus_musculus 0 682
ENSMUST00000120913 Gm11658-001 processed_pseudogene Mus_musculus 0 680
ENSMUST00000182724 Gm9149-001 processed_pseudogene Mus_musculus 0 678
ENSMUST00000122085 Gm15593-001 processed_pseudogene Mus_musculus 0 669
ENSMUST00000190835 RP24-347J6.3-001 processed_pseudogene Mus_musculus 0 669
ENSMUST00000182346 Gm9081-001 processed_pseudogene Mus_musculus 0 664
ENSMUST00000182705 Gm8343-001 processed_pseudogene Mus_musculus 0 651
ENSMUST00000119692 Gm5760-001 processed_pseudogene Mus_musculus 0 649
ENSMUST00000163135 Gm17068-001 processed_pseudogene Mus_musculus 0 641
ENSMUST00000118789 Gm6322-001 processed_pseudogene Mus_musculus 0 641
ENSMUST00000182638 Gm4518-001 processed_pseudogene Mus_musculus 0 638
ENSMUST00000183049 Gm5787-001 processed_pseudogene Mus_musculus 0 630
ENSMUST00000182716 Gm6771-001 processed_pseudogene Mus_musculus 0 630
ENSMUST00000183259 Gm8565-001 processed_pseudogene Mus_musculus 0 630
ENSMUST00000182835 Gm5839-001 processed_pseudogene Mus_musculus 0 628
ENSMUST00000182240 Gm8907-001 processed_pseudogene Mus_musculus 0 625
ENSMUST00000180794 Gm5976-001 processed_pseudogene Mus_musculus 0 621
ENSMUST00000118177 Gm15294-001 translated_processed_pseudogene Mus_musculus 0 614
ENSMUST00000117317 Gm5187-001 processed_pseudogene Mus_musculus 0 612
ENSMUST00000081029 Gm6498-001 processed_transcript Mus_musculus 0 608
ENSMUST00000182830 Gm8513-001 processed_pseudogene Mus_musculus 0 606
ENSMUST00000182906 Gm8100-001 processed_pseudogene Mus_musculus 0 606
ENSMUST00000182253 Gm5205-001 processed_pseudogene Mus_musculus 0 601
ENSMUST00000182678 Gm7191-001 processed_pseudogene Mus_musculus 0 597
ENSMUST00000182962 Gm8824-001 processed_pseudogene Mus_musculus 0 592
ENSMUST00000181990 Gm4823-001 processed_pseudogene Mus_musculus 0 586
ENSMUST00000182434 Gm8245-001 processed_pseudogene Mus_musculus 0 579
ENSMUST00000121384 Gm12403-001 processed_pseudogene Mus_musculus 0 575
ENSMUST00000182893 Gm5313-001 processed_pseudogene Mus_musculus 0 569
ENSMUST00000118643 Gm14921-001 processed_pseudogene Mus_musculus 0 569
ENSMUST00000180769 Gm7784-001 processed_pseudogene Mus_musculus 0 560
ENSMUST00000122262 Gm6298-001 processed_pseudogene Mus_musculus 0 558
ENSMUST00000119237 Gm13668-001 processed_pseudogene Mus_musculus 0 555
ENSMUST00000182862 Gm7456-001 processed_pseudogene Mus_musculus 0 549
ENSMUST00000182237 Gm6946-001 processed_pseudogene Mus_musculus 0 547
ENSMUST00000117214 Gm13870-001 processed_pseudogene Mus_musculus 0 536
ENSMUST00000182882 Gm9211-001 processed_pseudogene Mus_musculus 0 534
ENSMUST00000188041 RP24-347J6.4-001 processed_pseudogene Mus_musculus 0 529
ENSMUST00000182641 Gm5274-001 processed_pseudogene Mus_musculus 0 521
ENSMUST00000182698 Gm4398-001 processed_pseudogene Mus_musculus 0 520
ENSMUST00000181982 Gm5342-001 processed_pseudogene Mus_musculus 0 518
ENSMUST00000106038 RP24-347J6.6-001 processed_pseudogene Mus_musculus 0 516
ENSMUST00000122032 Gm7150-001 processed_pseudogene Mus_musculus 0 510
ENSMUST00000180655 Gm5262-001 processed_pseudogene Mus_musculus 0 497
ENSMUST00000182945 Gm8955-001 processed_pseudogene Mus_musculus 0 479
ENSMUST00000116649 Gm12419-001 processed_pseudogene Mus_musculus 0 479
ENSMUST00000181115 Gm8357-001 processed_pseudogene Mus_musculus 0 460
ENSMUST00000144205 Gapdh-005 processed_transcript Mus_musculus 0 436
ENSMUST00000117538 Gm11996-001 processed_pseudogene Mus_musculus 0 431
ENSMUST00000182069 Gm18848-001 processed_pseudogene Mus_musculus 0 424
ENSMUST00000182376 Gm26959-001 processed_pseudogene Mus_musculus 0 401
ENSMUST00000183221 Gm9192-001 processed_pseudogene Mus_musculus 0 375
ENSMUST00000182464 Gapdh-013 retained_intron Mus_musculus 0 363
ENSMUST00000120311 Gm12266-001 processed_pseudogene Mus_musculus 0 355
ENSMUST00000118477 Gm13501-001 processed_pseudogene Mus_musculus 0 346
ENSMUST00000181201 Gm7713-001 processed_pseudogene Mus_musculus 0 315
ENSMUST00000118893 Gm15957-001 processed_pseudogene Mus_musculus 0 313
ENSMUST00000182326 Gm8254-001 processed_pseudogene Mus_musculus 0 307
ENSMUST00000182079 Gm15294-002 protein_coding Mus_musculus 0 283
ENSMUST00000097296 Gm17199-001 processed_pseudogene Mus_musculus 0 254
ENSMUST00000182807 Gm27043-001 processed_pseudogene Mus_musculus 0 252
ENSMUST00000120406 Gm15554-001 processed_pseudogene Mus_musculus 0 233
ENSMUST00000182372 Gm27023-001 processed_pseudogene Mus_musculus 0 220
ENSMUST00000183320 Gm8167-001 processed_pseudogene Mus_musculus 0 219
ENSMUST00000119811 Gm7189-001 processed_pseudogene Mus_musculus 0 206
ENSMUST00000118210 Gm11550-001 processed_pseudogene Mus_musculus 3e-28 130
ENSMUST00000118859 Gm12719-001 processed_pseudogene Mus_musculus 5e-21 106

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