C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | Rho guanine nucleotide exchange factor (GEF) 40 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000182905  |
Arhgef40-004 |
ENSMUSG00000004562 |
10090 | + |
14:51984833-52005655  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0004Z0 | CIL_0004Z0_0003 | CGP | 14:51984719-52020733 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003674 | ND | molecular_function |
| GO:0005089 | IEA | Rho guanyl-nucleotide exchange factor activity |
| GO:0005575 | ND | cellular_component |
| GO:0008150 | ND | biological_process |
| GO:0032321 | IEA | positive regulation of Rho GTPase activity |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000298694
|
ARHGEF40-001 | protein_coding | Homo_sapiens | 0 | 3384 |
|
ENST00000553709
|
ARHGEF40-003 | nonsense_mediated_decay | Homo_sapiens | 0 | 3245 |
|
ENST00000554514
|
ARHGEF40-006 | retained_intron | Homo_sapiens | 0 | 1033 |
|
ENST00000555038
|
ARHGEF40-004 | protein_coding | Homo_sapiens | 0 | 1478 |
|
ENST00000555052
|
ARHGEF40-008 | retained_intron | Homo_sapiens | 0 | 320 |
|
ENST00000555232
|
ARHGEF40-005 | retained_intron | Homo_sapiens | 0 | 713 |
|
ENST00000556399
|
ARHGEF40-002 | nonsense_mediated_decay | Homo_sapiens | 0 | 1910 |
|
ENST00000557498
|
ARHGEF40-009 | retained_intron | Homo_sapiens | 0 | 259 |
