| Transcript ID | Brain | Ovary |
|---|---|---|
| ENST00000556399 | 1.261±0.00 | 0.874±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | Rho guanine nucleotide exchange factor (GEF) 40 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000556399  |
ARHGEF40-002 |
ENSG00000165801 |
9606 | + |
14:21070291-21089555  |
nonsense_mediated_decay |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0004TH | CIL_0004TH_0001 | CGP | 14:20999255-21070872 |
| CIL_00027R | CIL_00027R_0001 | CGP | 14:21016763-21070872 |
| CIL_0004Z0 | CIL_0004Z0_0002 | CGP | 14:21070270-21104722 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000183208
|
Arhgef40-008 | nonsense_mediated_decay | Mus_musculus | 0 | 4567 |
|
ENSMUST00000182061
|
Arhgef40-006 | protein_coding | Mus_musculus | 0 | 3009 |
|
ENSMUST00000100639
|
Arhgef40-005 | protein_coding | Mus_musculus | 0 | 2942 |
|
ENSMUST00000182909
|
Arhgef40-003 | protein_coding | Mus_musculus | 0 | 2782 |
|
ENSMUST00000093813
|
Arhgef40-001 | protein_coding | Mus_musculus | 0 | 2782 |
|
ENSMUST00000182760
|
Arhgef40-007 | protein_coding | Mus_musculus | 0 | 2628 |
|
ENSMUST00000182905
|
Arhgef40-004 | nonsense_mediated_decay | Mus_musculus | 0 | 1910 |
|
ENSMUST00000182740
|
Arhgef40-002 | retained_intron | Mus_musculus | 0 | 1345 |
|
ENSMUST00000182644
|
Arhgef40-010 | retained_intron | Mus_musculus | 0 | 1170 |
|
ENSMUST00000182961
|
Arhgef40-009 | retained_intron | Mus_musculus | 0 | 990 |
|
ENSMUST00000182338
|
Arhgef40-013 | nonsense_mediated_decay | Mus_musculus | 0 | 780 |
|
ENSMUST00000182412
|
Arhgef40-017 | nonsense_mediated_decay | Mus_musculus | 0 | 715 |
|
ENSMUST00000182193
|
Arhgef40-012 | protein_coding | Mus_musculus | 0 | 361 |
|
ENSMUST00000182019
|
Arhgef40-015 | retained_intron | Mus_musculus | 0 | 350 |
|
ENSMUST00000183213
|
Arhgef40-022 | retained_intron | Mus_musculus | 0 | 346 |
|
ENSMUST00000182828
|
Arhgef40-025 | protein_coding | Mus_musculus | 0 | 346 |
|
ENSMUST00000182480
|
Arhgef40-016 | processed_transcript | Mus_musculus | 0 | 329 |
|
ENSMUST00000182667
|
Arhgef40-024 | protein_coding | Mus_musculus | 0 | 315 |
|
ENSMUST00000183022
|
Arhgef40-019 | retained_intron | Mus_musculus | 0 | 285 |
|
ENSMUST00000182504
|
Arhgef40-026 | retained_intron | Mus_musculus | 0 | 235 |
|
ENSMUST00000182217
|
Arhgef40-021 | protein_coding | Mus_musculus | 0 | 233 |
|
ENSMUST00000182777
|
Arhgef40-023 | retained_intron | Mus_musculus | 0.0000000002 | 73 |
