C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | Rho guanine nucleotide exchange factor (GEF) 40 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000555052  |
ARHGEF40-008 |
ENSG00000165801 |
9606 | + |
14:21074777-21076456  |
retained_intron |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0004TH | CIL_0004TH_0001 | CGP | 14:20999255-21070872 |
| CIL_00027R | CIL_00027R_0001 | CGP | 14:21016763-21070872 |
| CIL_0004Z0 | CIL_0004Z0_0002 | CGP | 14:21070270-21104722 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000182740
|
Arhgef40-002 | retained_intron | Mus_musculus | 0 | 337 |
|
ENSMUST00000182961
|
Arhgef40-009 | retained_intron | Mus_musculus | 0 | 320 |
|
ENSMUST00000182061
|
Arhgef40-006 | protein_coding | Mus_musculus | 0 | 320 |
|
ENSMUST00000182760
|
Arhgef40-007 | protein_coding | Mus_musculus | 0 | 320 |
|
ENSMUST00000182909
|
Arhgef40-003 | protein_coding | Mus_musculus | 0 | 320 |
|
ENSMUST00000100639
|
Arhgef40-005 | protein_coding | Mus_musculus | 0 | 320 |
|
ENSMUST00000093813
|
Arhgef40-001 | protein_coding | Mus_musculus | 0 | 320 |
|
ENSMUST00000182905
|
Arhgef40-004 | nonsense_mediated_decay | Mus_musculus | 0 | 320 |
|
ENSMUST00000183208
|
Arhgef40-008 | nonsense_mediated_decay | Mus_musculus | 1.4013e-45 | 187 |
